Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRYRPFGSTGVAVSALTLRLADNPRLRANDWRALVFTALENGVNSFQIDGDAPELLKGAGEAFAS------VERHLLFLTWRLRGDAKQLGPHTLDALKRSAFEGLSLDYLDLLLINDPQ-------------------SASLPMAFESGLQDLQKGRALRGLGVASRGDIDP-GLLAND----LVTAVSSPYNLSSGWAERHRIRQASQNNFAVIGEDFWPQALREVADKAPPKPSFWQRRTDPLADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVVERDLPTGVCAQIEMARFSAQEREKAARRP |
| 1AFS Chain:A ((5-300)) | SLRVAL-NDGNFIPVLGFGTTVPEKVAKDEVIKATKIAIDNGFRHFDSAYLYE-VEEEVGQAIRSKIEDGTVKREDIFYTSKLWS--TFHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLN--QSKMLDYCKSKDIILVSYCTLGSSRDK-TWVDQKSPVLL--------DDPVLCAIAKKYKQTPALVALRYQLQRG-V-VPLIRSFNAKRIKELTQVFEFQLASEDMKALDGLN------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131151 for 2195 contacts (-59.7/contact) +
2D Compatibility (PS) -28294 + (NN) -9990 + (LL) 2172
1D Compatibility (HY) -11200 + (ID) 1850
Total energy: -180313.0 ( -82.15 by residue)
QMean score : 0.306
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