Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGTGADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKSMLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAAVSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLDMAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLL---AARGDEIVNFPQVRSCGTSTAHSLPCMFSTFDRTD----------YDEIKAEHQDNLLDIVQRAGVEVTWLEN----D-SGCKGVC-------G--------KVPN---------TDVTSLNLPEYCRN-------GECLDNILLTKFDEVLNKND--KDAVLILHTIGSHGPT-----YYERYTEAER---KFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDD-LESVVHYVSDHG------------ESLGENGMYL--HAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENEYSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR |
| 3ED4 Chain:A ((27-377)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QPN-LVIIMADDLGYGDLATYGHQIVKTPNIDRLAQEG---VKFTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWIPSGKDVALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQDMGFDYSLANTAGFVTDATLDNAKERPRYGMVYPTGWLRNGQPTPRADKMSGEYVSSEVVNWLDNKKDSKPFFLYVAFTEVHSPLASPKKYLDMYSQYMSAYQKQHPDLFYGDWA-DKPWRGVGEYYANISYLDAQVGKVLDKIKAMGEEDNTIVIFTSDNGPVTREARKVYELNLAGETDGLRGRKDNLW----EGGIRVPAIIKYGKHLPQ----------GMVSDTPVYGLDWMPTLAKMMNFK------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ED4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124362 for 2231 contacts (-55.7/contact) +
2D Compatibility (PS) -29724 + (NN) -10133 + (LL) 22632
1D Compatibility (HY) -12800 + (ID) 2100
Total energy: -156487.0 ( -70.14 by residue)
QMean score : 0.179
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