Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------MEDSPTMVRVDSPTMVRGENQVSPCQGRRCFPKALGYVTGDMKELANQLKDKPV--VLQFI-------DWILRGISQVVFVNNPVSGILILVGLLVQNPWWALTGWLGTVVSTLMALLLSQDRSLIASGLYGYNATLVGVLMAVFSDKGDYFWWLLLPVCAMSMTCPIFSSALNSMLSKWDLPVFTLPFNMALSMYLSATGHYN--------------PFFPAKLVIPITTAPNISWSDLSALELLKSIPVGVGQIYGCDNPWTGGI---------FLGAILLSSPLMC------------------LHAAIGSLLGIAAGLS---------LSAPFE---------DIYFGLWGFNSSLACIAMGGMF-----------------------MALTWQTHLLALG-------CALFTAYLGVGM-------ANFMAEVGLPACTWPFCL-----ATLLFLIMTTKNSNIYKMPLSKVTYPEENRIF----------YLQAKKRMVESPL |
| 2BVL Chain:A ((1-543)) | MSLVNRKQLEKMANVRFRTQEDEYVAILDALEEYHNMSENTVVEKYLKLKDINSLTDICIDTYKKSGR-NKALKKFKEYLVTEVLELKNN-NLTPVEKNLHFVWIGGQINDTAINYINQWKDVNSD-----YNVNVFYDSNAFLINTLKKTVVESAINDTLESFRENLNDPRFDYNK-FFRKRMEIIYDKQKNFINYYKAQREENPELIIDDIVKTYLSNEYSKEIDELNTYIEESLNKITQNSGNDVRNFGEFKNGESFNLYEQELVERWNLAAASDILRISALKEIGGMYLDVDMLPGIQPDLFESIEKPSSVTVDFWEMTKLEAIMKYKEYIPEYTSEHFDMLDEEVQSSFESVLASKSDKSEIFSSLGDMEASPLEVKIAFNSKGIINQGLISVKDSYCSNLIVKQIENRYKILNNSLNPAISEDNDFNTTTNTFIDSIMAEANADNGRFMMELGKYLRVGFFPDVKTTINLSGPEAYAAAYQDLLMFKEGSMNIHLIEADLRNFEISKTNISQSTEQEMASLWSFDDARAKAQFEEYKRNYFEGAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241297 for 2687 contacts (-89.8/contact) +
2D Compatibility (PS) -39065 + (NN) -11265 + (LL) 428
1D Compatibility (HY) -15200 + (ID) 3500
Total energy: -309899.0 ( -115.33 by residue)
QMean score : 0.134
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