Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKKILGLLGLALAAAFVLTACGQKNDKNTLTVGVMTMTDSDKERWDKIEELLKKE-NIKLKFKEFTDYSQPNKALKNGEIDINSFQHYNFLNNWNKENKGDLVTVAETYISPINLFSGTENGKAKYSSAKEIPNGGQIAIPNDATNESRALYVLQDAGLIKLNVSGDELATVKNIKSNPKNLDIKEVDASQTARNLASVDAAVVNNSYAVPAKIDF-KTSLYKEKVNEGSKQWINIIAAQKNWKKSKKAAAIKKLIKAYHTDAVKKVIKKTAKGVDEPVW |
| 3K2D Chain:A ((4-237)) | ---------------------------DTSKVKVGVMAGA--EAQVAEVAAKVAKEKYGLDVELVTFTDYVTPNAALDDGSIDMNAFQHKPYLDRQVEDRDYKLTIAGNTFVYPIAGYS------KQVKSVAALADGVRIAVPNDPTNLGRSLLLLEQQGLIKLRPEVGLLATVRDIVENPKNITIMELDAAQLPRSLDDVALSIINTTYASSINLTPEKDGVFVEDKE---SPYVNLIVARQD---NVQNENVQNFVKAYQTEEVYTAAKEIFK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K2D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43595 for 1940 contacts (-22.5/contact) +
2D Compatibility (PS) -24640 + (NN) -9828 + (LL) 2712
1D Compatibility (HY) -16000 + (ID) 3800
Total energy: -95151.0 ( -49.05 by residue)
QMean score : 0.384
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