Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRVIFLLTGLFIWTSVLLAQNVPEGVIGAFKEGNSQELNKYLGDKVDLIIQNKSTH---ADKRTAEGTMAAFFSNHKVGSFNVNHQGKRDESGFVIGIL-MTANGNFRVNCFFRKVQNKYVIHQIRIDKTDE
3BLZ Chain:A ((16-126))
----------------------EVLSKYNEGGKKADSTIMRPAFSSQATIFGVDVDNKLTGGPIQGLFDVIDNVFHPSPEAKAAIARIDIVGTAASARIDTDDISGFRFTDFFNLLKVEGKWTVVSKIYHTHP-
General information:
TITO was launched using:
RESULT:
Template:
3BLZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44820 for 756 contacts (-59.3/contact) +
2D Compatibility (PS) -11223 + (NN) 631 + (LL) 2800
1D Compatibility (HY) 0 + (ID) 400
Total energy: -53012.0 ( -70.12 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_3BLZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BLZ-query.scw
PDB file :
Tito_Scwrl_3BLZ.pdb
: