Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKAKLILIAVLVLSGCSTIENESKKDRNTETNTETKSVPEEMEASKYVGQGFQPPAEKDAIEFSKKHKDKIAKRGEQFFMDNFGLKVKATNVVGSGDGV-EVFVHC-DDHDIVFNASIPFDKSIIESDSSLRSEDKGDDMSTLVGTVLSGFEYRAHKEELDNLTEVLKEYKSKYKYTGYTENAIMKTQNSGFRNEYYYLTAIPYTLDEYKRYFQPLIKEDDKSFRDGMRNSKKQLKDKSRPYVVTTLFSTKDNFTKDNTIDEMIDFSEVLKKKKNIPHDLNVSLQISNKYINTKRPNYSKKEVIEVGVFNHEKANTND |
| 3E5D Chain:A ((15-58)) | --------------------------------------------------------------------------EQMKQFYVTYFGATANDLYENK-TKGFNSYFLSFEDGARLEIMSR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16355 for 213 contacts (-76.8/contact) +
2D Compatibility (PS) -4925 + (NN) -1989 + (LL) 16332
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -9687.0 ( -45.48 by residue)
QMean score : 0.011
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