Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLSAWESVKGGAAEWDVHDGVFTVNKKKGDIQTKQKFNDFQMHIEWQVPTNITGESQSRGNSGIFLQ-----------GMYEVQVLDCYNNPTYVNGQTGS-IYKQSIPL--ANAMRKPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQNHTTILGTTEWIGFPQVKKHGAGPIILQSHGDPSEPISFRNIWIREL |
| 4CCD Chain:A ((520-652)) | ----------------------------------------------------------------------------------------------------------VIGDHHWTNMTVQCDVYIETPR------SGGVFIAGRVNKGGILIRSATGVFFWIFA---NGSYR---VTADLGG-WITYASGHADVTAKRWYTLTLGIKG-------Y-----FAFGMLNGTILWKNVRV----------KY--PGHGWAAIGTHTF--EFAQFDNFRVEA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CCD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59728 for 910 contacts (-65.6/contact) +
2D Compatibility (PS) -12822 + (NN) -2511 + (LL) 6332
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -74779.0 ( -82.17 by residue)
QMean score : 0.247
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