Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHHHHHHSHMQQAISEKDRGNGFFKEGKYERAIECYTRGIAADG---ANALLPANRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKK
2DBA Chain:A ((28-143))
-------------VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS-
General information:
TITO was launched using:
RESULT:
Template:
2DBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 15310 for 895 contacts (17.1/contact) +
2D Compatibility (PS) -12515 + (NN) -6545 + (LL) 828
1D Compatibility (HY) -4000 + (ID) 2050
Total energy: -8972.0 ( -10.02 by residue)
QMean score : 0.333
(partial model without unconserved sides chains):
PDB file :
Tito_2DBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DBA-query.scw
PDB file :
Tito_Scwrl_2DBA.pdb
: