Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIKKLFSIFTLVILVFATACTNKSEKATVSDTNEKPKEEIKIVEPNGAEKTKLNLNFGVGKLNISGNEEKLMKGKFIYSENEWKPEIKYEVKDKDGELEISQPGLKSGNVSLNNKRNEWNINLNEKIPTEIKLSLGTGEFKADLSKINLKELNVGMGVGKVDLDISGNY-K-NNVKVNIEGGVGEATVYLPKSIGVKIKAEKGVGAVNANGFIVEGENIYKNSQYGKSKNSIEVNIEAGVGAINIKQK |
2K8Q Chain:A ((3-81)) | ------------------------------------------------------------------------------------TPRFSITQDEEFIFLKIFISNIRF-------SAVGLEIIIQENM---IIFHL---------------------SPYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKL------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26531 for 469 contacts (-56.6/contact) +
2D Compatibility (PS) -8300 + (NN) -144 + (LL) 9780
1D Compatibility (HY) -5200 + (ID) 500
Total energy: -30895.0 ( -65.87 by residue)
QMean score : 0.176
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