Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GEEKMTNGQLWKKVKDSLIDSNIISGNENEEITVTYVNKTGYSSSVSAYGNNNDDFSSTPSNFSKLKEIDLKKDNVPSDDFNTTVSGEDSWKTLTSKLKEKGLVTDGQTVTIHCNDKSDNTKSSVSGKVGADLTSGNGTTFKKRFIDKITID
2E28 Chain:A ((428-460))
-------------------------------------------------------------------------------------TTDEMLDVAVDAAVRSGLVKHGDLVVITAGVPV----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2E28.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2000 for 140 contacts (-14.3/contact) +
2D Compatibility (PS) -3550 + (NN) -1301 + (LL) 3772
1D Compatibility (HY) -800 + (ID) 300
Total energy: -4179.0 ( -29.85 by residue)
QMean score : 0.136
(partial model without unconserved sides chains):
PDB file :
Tito_2E28.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E28-query.scw
PDB file :
Tito_Scwrl_2E28.pdb
: