Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MLTVEVEVKITADDEN--KAEEIVKRVIDEVEREVQKQYPNATITRTLTRDD-GTVELRIKVKADTEEKAKSIIKLIEERIEEELRKRDPNA-TITRTVRTEVGSSWSLEHHHHHH
1J27 Chain:A ((1-98))
MKAYLGLYTARLETPARSLKEKRALIKPALERLKAR----F-PVSAARLYGLDAWGYEVVGFTLLGNDPAWVEETMRAAARFLAE-----AGGFQVALEEFRLEAFEL----------
General information:
TITO was launched using:
RESULT:
Template:
1J27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19782 for 626 contacts (-31.6/contact) +
2D Compatibility (PS) -10733 + (NN) -7315 + (LL) 1572
1D Compatibility (HY) -1600 + (ID) 350
Total energy: -38208.0 ( -61.04 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_1J27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J27-query.scw
PDB file :
Tito_Scwrl_1J27.pdb
: