Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQQFQTIALIGIGLIGSSIARDIREKQLAGTIVVTTRSEATLKRAGEL-------------GLGD----------RYTLSAAEAVEGADLVVVSVPVG--ASGAVAAEIAAHLKPGAIVTDVGSTK-GSVIAQMAPHLPKDVHFVPGHPIAGTEHSGPDAGFAGLFRGRWCILTPPAGTDEEAVARLRLFWETLGSMVDEMDPKHHDKVLAIVSHLPHII-AYNIV----GTADDLETVTESEVIKYSASGFRDFTRLAASDPTMWRDVCLHNKDAILEMLARFSEDLASLQRAIRWGDGDKLFDLFTRTRAIRRSIVQAGQDTAMPDFGRHAMDQK |
| 4E12 Chain:A ((1-255)) | MTG-ITNVTVLGTGVLGSQIAFQTAFHGF--AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGR-G--DKFLALHFANHVWVN------------NTAEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLL-VPLLDAAAELLVDGIADPETIDK-----TWRIG-TGAP-------KGPFEIFDI--VGLTTAYNISSVSGPKQ------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4E12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139506 for 1733 contacts (-80.5/contact) +
2D Compatibility (PS) -25009 + (NN) -13573 + (LL) 5028
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -181510.0 ( -104.74 by residue)
QMean score : 0.290
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