Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTFLIIIGLFLFIGNSFAQSYEELIEKSYDFVDKGDLVSAEESLKAAMRKEPANPLNYALLTNLGTIQRRQGKLQEAL----------------------------------------------------------------------------------------------------------------------------------ISYTSALSGHTKNITILENRASLYTELGETEKALNDYNTLLIENPEHQEALYCRGLLYIQLQNYMWAEQDFDKILEVNEKSVRARLGHAILEKMRGNYDESERIFNYLISEMPRDWILYEGRADLYFMMGKNARAMADIEKVFTESEPTAN------LYVLRGKIKLAQ------YEKERAALDFKKAESMGYNKEVIKELLKLTMNN |
3FP2 Chain:A ((38-472)) | AKNFN-AIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKA---LLRRASANESLGNFTDAMFDLSVLSPMLERNLNKQAMKVLNENLSQVLPSNTSLASFFGIFDSHLEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLVANDLLTKSTDMYHSLLSTVDDPLRENAALALCYTGIFHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQLDEEKFNAAIKLLTKACELDPRSEQAKIGLAQLK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19657 for 1950 contacts (-10.1/contact) +
2D Compatibility (PS) -29483 + (NN) -17688 + (LL) 376
1D Compatibility (HY) 0 + (ID) 2550
Total energy: -69002.0 ( -35.39 by residue)
QMean score : 0.395
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