Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGH
3OW8 Chain:A ((81-289))
-LGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH
General information:
TITO was launched using:
RESULT:
Template:
3OW8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49449 for 1643 contacts (-30.1/contact) +
2D Compatibility (PS) -22754 + (NN) -21184 + (LL) -28
1D Compatibility (HY) -16400 + (ID) 3400
Total energy: -113215.0 ( -68.91 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_3OW8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OW8-query.scw
PDB file :
Tito_Scwrl_3OW8.pdb
: