Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTSVWGKSILALVFTFMCSLAISAASPKDYLYDTKEENGKIISKVVFLQENGLLNKQVRYEFQYNENGKVSEKK-------AFRWDRTNDEWV-----------PFYQITYQYDDQSGEIKTNYGMWDKKKKNFS--LNVQNMIIPSTNYEEIFS |
4O9X Chain:A ((1783-1877)) | ----------------------------------------------------------IIKSLTYSAAGQKLREEHGNDVITEYSYEPETQRLIGIKTRRPSDTKVLQDLRYEYDPVGNVISIRNDA--EATRFWHNQKVMPENTYTYDSLYQLI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13038 for 358 contacts (36.4/contact) +
2D Compatibility (PS) -7890 + (NN) -2880 + (LL) 4592
1D Compatibility (HY) -4000 + (ID) 300
Total energy: 2560.0 ( 7.15 by residue)
QMean score : 0.077
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