Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKYLTIVIALVTLQSAFSQVISETFSSGRLNRKQKIGIYKPEKYTDRQAYPLIVVLNAET--LMEPVVSMVRYYEQFGEMPKCIVVGVYE-P---KQEDVTVVEEVGRPINESARFFEFVSAELVPYIQGKYPI--A-DLKGVIASEEAGFLANYYMLAEKKPTFNMIVSLNPVALPRMG-----EEFSHALAAG--VPNRLFYYMATADVENKVVYDKAIQFERAMRSAPVHESVEYHFVDFKGSSVNAA-KLQGIAQALDMCFDIYKPIGGKEFKTQMETLETGIYEYLENKYNTIYKQLGVKKVPILNDVMATYTAINSSQDWESLKKLAKYVESNGYLKTAMPNFFLAEYYEKIGDDKKALKTYQKAYTEPNIDFITGDLINERITHLQATKRKSKHTKVIEPIEPTEEVAPAQEEQNPTDESNQN |
3C8D Chain:A ((167-398)) | -------------------PAKEIIWKSERLKNSRRVWIFTT------EERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHEL----------PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSA-LYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEGLRIVLEAGIREP-MIMRANQALYAQLHPI----KESIFWRQVDGG-HDALCWRGGLMQGLIDLWQPL------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159524 for 1759 contacts (-90.7/contact) +
2D Compatibility (PS) -23163 + (NN) -11976 + (LL) 14228
1D Compatibility (HY) -10400 + (ID) 1850
Total energy: -192685.0 ( -109.54 by residue)
QMean score : 0.244
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