Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKYLTIVIALVTLQSAFSQVISETFSSGRLNRKQKIGIYKPEKYTDRQAYPLIVVLNAET--LMEPVVSMVRYYEQFGEMPKCIVVGVYE-P---KQEDVTVVEEVGRPINESARFFEFVSAELVPYIQGKYPI--A-DLKGVIASEEAGFLANYYMLAEKKPTFNMIVSLNPVALPRMG-----EEFSHALAAG--VPNRLFYYMATADVENKVVYDKAIQFERAMRSAPVHESVEYHFVDFKGSSVNAA-KLQGIAQALDMCFDIYKPIGGKEFKTQMETLETGIYEYLENKYNTIYKQLGVKKVPILNDVMATYTAINSSQDWESLKKLAKYVESNGYLKTAMPNFFLAEYYEKIGDDKKALKTYQKAYTEPNIDFITGDLINERITHLQATKRKSKHTKVIEPIEPTEEVAPAQEEQNPTDESNQN
3C8D Chain:A ((167-398))-------------------PAKEIIWKSERLKNSRRVWIFTT------EERPLAVLLDGEFWAQSMPVWPVLTSLTHRQQLPPAVYVLIDAIDTTHRAHEL----------PCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSA-LYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEGLRIVLEAGIREP-MIMRANQALYAQLHPI----KESIFWRQVDGG-HDALCWRGGLMQGLIDLWQPL------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3C8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159524 for 1759 contacts (-90.7/contact) +
2D Compatibility (PS) -23163 + (NN) -11976 + (LL) 14228
1D Compatibility (HY) -10400 + (ID) 1850
Total energy: -192685.0 ( -109.54 by residue)
QMean score : 0.244

(partial model without unconserved sides chains):
PDB file : Tito_3C8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C8D-query.scw
PDB file : Tito_Scwrl_3C8D.pdb: