Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSSNGGAIKAVIYDCDGVMFDSFEANLAFYQRIMEMMGRPRLSRDNEEQMRILHTYANREVLAHFFPS---PGDWEEAVRCAGAIDYRELVP--LMIMEEGFREALDTLKG-RVGLGVCTNRSTS-MDMVLRLFSLDSYFSIVMTASRVTNPKPHPEPLLKVLEHFGIGPREALFVGDSEVDRLSAEAAGVPFVAYKAPL---------PAAYRMEHHREIIDLLG
4EX6 Chain:A ((17-232))
-------AADRGVILDLDGTLADTPAAIATITAEVLAAMGT-AVS---RGAILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAV-
General information:
TITO was launched using:
RESULT:
Template:
4EX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -168336 for 1761 contacts (-95.6/contact) +
2D Compatibility (PS) -22298 + (NN) -15853 + (LL) -132
1D Compatibility (HY) -5600 + (ID) 2150
Total energy: -214369.0 ( -121.73 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_4EX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EX6-query.scw
PDB file :
Tito_Scwrl_4EX6.pdb
: