Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSNGEEPKMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIVGTILGFTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMGMRAVVYYMTTTIIAVVIGIIIVIIIHPGKGTKENMHREGKIVRVTAADAFLDLIRNMFPPNLVEACFKQFKTNYEKRSFKVPIQANETLVGAVINNVSEAMETLTRITEELVPVPGSVNGVNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPVGILFLIAGKIVEMEDMGV-IGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRK---NPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDD------ITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENEMKKPYQLIAQDNETEKPIDSETKM |
| 4IZM Chain:C ((20-412)) | ---------------------------------------------------------LILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASCVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGI--HLAVGGQQFQPHQAPPLVHILLDIVPTNPFGALANG--------------QVLPTIFFAIILGI--AITYLMNSENE----------------------------KVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIA---YVMAEQGVHVVGELAKVTAAVYVGLTLQILLV----YFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEM-GISEGIYCFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IZM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -310996 for 3127 contacts (-99.5/contact) +
2D Compatibility (PS) -39112 + (NN) -4878 + (LL) 10320
1D Compatibility (HY) -41600 + (ID) 7250
Total energy: -393516.0 ( -125.84 by residue)
QMean score : 0.223
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