Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRVIFLLTGLFIWTSVLLAQNVPEGVIGAFKEGNSQELNKYLGDKVDLIIQNKSTHADKRTAEGTMAAFFSNHKVGSFNVNHQGKRDESGFVIGILM--TANGN---FRVNCFFRKVQNKYVIHQIRIDKTDE
3F14 Chain:A ((6-107))
------------------------HYSIAQHFSSGDFPAVYACFNDIIEWNIIGNQVVKGKADVIDFCNKMLPEMKGAVLTNDNVIQNENQIVIEGKCRYFDAEGKEAFVSYCDIYRFENDT--IKTI-------
General information:
TITO was launched using:
RESULT:
Template:
3F14.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29711 for 620 contacts (-47.9/contact) +
2D Compatibility (PS) -10211 + (NN) 1117 + (LL) 3464
1D Compatibility (HY) -4800 + (ID) 600
Total energy: -40741.0 ( -65.71 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_3F14.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F14-query.scw
PDB file :
Tito_Scwrl_3F14.pdb
: