Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAFSRFTPLIQSLPASVPFVGPEALERQHGRKIAARIGANESGFGPAPSVLLAIRQAAGDT--WKYA-DPENHDLKQALARHLG------TSPA-NIAIGEGIDGLLGQIVRLVVEAGAPVVTSLGGYPTFNYHVAGHGGRLVTVPYADDR--EDLEGLLAAVGRENAPLVYLANPDNPMGSWWPAERVVAFAQALPE-TTLLVLDEAYCETAPRDALPPIESLI-DKPNVIRARTFSKAYGLAGARIGYTLSTPGTAQAFDKIRNH--FGMSRIGVAAAIAALADQ-DYLKEVTLKIANSRQRIGRIAADSGLAPL-PSATNFVAVDCGKDASYARAIVDRLMSDHGIFIRMPGVAPL--NRCIRISTAPD-AEMDLLAAALPEVIRSLAAT |
| 2O1B Chain:A ((22-402)) | ------ISNKLANIPDSYFG--------EHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEPPHYLPDWSKVDSQII-DKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPP-GYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTELAYL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184629 for 3004 contacts (-61.5/contact) +
2D Compatibility (PS) -38950 + (NN) -28722 + (LL) 1576
1D Compatibility (HY) -14000 + (ID) 3900
Total energy: -268625.0 ( -89.42 by residue)
QMean score : 0.554
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