Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRALSLLLALCLCLSLMPAASASVVESTVQVGPYTFEIWFDGTATLTRYDESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEET-NITGVTVPDS--VISIGRLAFAYCNSLSDVKLSE-NLIYINELAFASCDALKEITIPA-SVEKMD-NPFRWSNALDTVYMEGMVAPE
1OZN Chain:A ((69-161))
-----------------------------------------------------------------------------ARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLH------
General information:
TITO was launched using:
RESULT:
Template:
1OZN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78605 for 556 contacts (-141.4/contact) +
2D Compatibility (PS) -8398 + (NN) 3282 + (LL) 5864
1D Compatibility (HY) -7200 + (ID) 750
Total energy: -85807.0 ( -154.33 by residue)
QMean score : 0.182
(partial model without unconserved sides chains):
PDB file :
Tito_1OZN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OZN-query.scw
PDB file :
Tito_Scwrl_1OZN.pdb
: