Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKSLLMVMATLTIAGCSQNEMTEMNPDTNRTIGLDVYTEVQTRGTETTTSTLKANAGFGIFAYQTSSAGWNSE--------KGNTTPNFMYNEHATWTSDSW-GYTNLRFWPIDDKKITFFAYAPYESKPEVGTDQKITLSGQNAKGAPTITFEVKTSNNWKDMIDLVTDCHTAIQDQTNESNKGTVQFK-FSHVLTQIANIKVKPDVNLGTDTKIFVTGLKLDPGSTTLYNKAVYKFDNDTWEAISPDASYFSTEQDLSDFLNKTTTDQWGYNKSSINVSDDQNATALFSDTEALYFIPVNNKNGTTNAGDLKLKINYDIVTKVTDTSNLTSTITNKEVSLPKNTFKKGTKHTYVLTIKMNAIKITVEDNMEGWTDDSDSDINVEK |
| 4H40 Chain:A ((52-209)) | ------------------------------------------------------EDGSTIRLVVYDDAKNLLEEYSKAYLVRNAGTSGSSLLYPCEVDDNGAVISSSSTPLYMKA--GTYYFRILSPAKALNSKG---F----VNIGNGEYLLA-----TDDRYTQTA-MTAVTIT--------NVQTLYLPPIINQTARMQFTVRAGEGVHT--LEMLAEGIEISGI----------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4721 for 726 contacts (-6.5/contact) +
2D Compatibility (PS) -14742 + (NN) -820 + (LL) 13536
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -10497.0 ( -14.46 by residue)
QMean score : 0.026
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