Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLPDIVNMYFDADSCNDTDALSETFAPDAVVEDEG-----ARHQGVVAILR-WWVAAKKAA-SYVAEPLESTVDGDKALVRAKVSGRFP--GSPVTLTY--SFTIKDGRIARLEIQ
3EC9 Chain:A ((15-127))
---YQIVADHYAASDRHDPAAMMADIAPAIEWTEMAGFPCAGTYRSADEIVRNVFRRLGEEWDGYTFKLDALHDAGDTVIGVGRYSGTYRRTGKSFECRVAHVWRVDAGKIVHFEQ-
General information:
TITO was launched using:
RESULT:
Template:
3EC9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31586 for 640 contacts (-49.4/contact) +
2D Compatibility (PS) -11208 + (NN) -4858 + (LL) 428
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -51724.0 ( -80.82 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_3EC9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EC9-query.scw
PDB file :
Tito_Scwrl_3EC9.pdb
: