Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGTGADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKSMLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAAVSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLDMAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLL---AARGDEIVNFPQVRSCG-TSTAHSLPCMFSTFD-RT-------DYDEIK---------------AEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKVPNTDVTSLNLPEY--CRNGECLDNILLTKFDEVLNKN--DKDAVLILHTIGSHGPTYYERYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDD-LESVVHYVSDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENEYSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR |
| 2GSO Chain:A ((6-225)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHALLLISIDGLRADMLDR-----GITPNLSHLAREG---VRARWMAPSYPSLTFPNHYTLVTGLRPDHHGIVHNSMRDPTLGGFWLSKSEAVGDARWWGGEPVWVGVENTGQHAATWSW-PGSEAAIKGV---------RPSQWRHYQKGVRLDTRVDAVRGWLATDGAQRNRLVTLYFEHVDEAG--HDHG-------PE--------------SRQYADAVRAVDAAIGRLLAGMQRDGTRARTNIIVVSDHGMAEVA------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GSO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68871 for 1420 contacts (-48.5/contact) +
2D Compatibility (PS) -20357 + (NN) -6874 + (LL) 27844
1D Compatibility (HY) -1200 + (ID) 1450
Total energy: -70908.0 ( -49.94 by residue)
QMean score : 0.125
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