Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRVIFLLTGLFIWTSVLLAQNVPEGVIGAFKEGNSQELNKYLGDKVDLIIQNKSTHADKRTAEGTMAAFFSNHK-VGSFNVNHQGKRDESGFVIGILM----TA-NGN-FR----VNCFFRK-VQNKYVIHQIRIDKTDE
3ROB Chain:A ((21-133))
----------------------TVQYRWLEATRKFDRQVLSSLMTDDVVFLTPGRL-PFGKEEFLAACEQNDQRVIIEASATFEEIVIVEPMAYTRTHLHIKVTPRSGGAVRELAGHAMSIFRRSMFGEWQLARDA------
General information:
TITO was launched using:
RESULT:
Template:
3ROB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36402 for 597 contacts (-61.0/contact) +
2D Compatibility (PS) -10994 + (NN) -474 + (LL) 3020
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -46650.0 ( -78.14 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_3ROB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ROB-query.scw
PDB file :
Tito_Scwrl_3ROB.pdb
: