Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNSRRDFLKKGALAGFSALMIPEIAKAAVKENTSVHAPKIN-LKKDCVILFQGDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQLRERWEIDCLAFQPDVLSILIGVNDYWHTLTHGYKGTVETYENDLRALLKYTKEKLPNTQIVLCEPFTLRDGAAIED-SKWYPMFDEFRKSARKLSEEFNTIFVPFQSGF-DAAVKLAPARYWSNDGVHPDLPGRQLMANMWMEATGLK |
| 4IYJ Chain:A ((4-209)) | ---------------------AQKQDWGNLKRYAEANKELVRKGKQKDRVVFMGNSITEGWV------------------ANDAAFFE------DNGYVGRGIGGQTSSHFLLRFREDVIKLAPALVVINAGTNDIAEN---AGAYNEEYTFGNIVSMVELARA--NKIKVILTSVLPAAAFGWNPSVKDAPQKIMQLNARIRKYAQENKIPYVDYYSEMVEGDNKA-LNSSYTRDGVHPTLEGYKVMEALIKKAID-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IYJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80749 for 1646 contacts (-49.1/contact) +
2D Compatibility (PS) -22162 + (NN) -8680 + (LL) 3272
1D Compatibility (HY) -3600 + (ID) 1800
Total energy: -113719.0 ( -69.09 by residue)
QMean score : 0.262
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