Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEPIILRYFPVLGRAQALRHALADAELAFRDLRIPLEQWSQHKDSDAGGPYGSLPTLRWHGVEVAETIAIASFLARSLGHYEGRDNGEIARLEAVVSLCYTEVSLQIAQLLWLDLFNPGVDLAAAVPLQFGRLVARLTRLEAHTPE----AGWFGGERPVMADYFAAEAIEALRYLLGREHDDALRTRLPHLCALARRMAQRPALAQAWSTRPQTFTAHPDEAAMLERLRALPLAATIGASME
1TU7 Chain:A ((1-200))
--MSYKLTYFSIRGLAEPIRLFLVDQDIKFIDDRIAKDDFSSIKSQ---FQFGQLPCLYDGDQQIVQSGAILRHLARKYNLN-GENEMETTYIDMFCEGV-RDLHVKYTRMIYMAYE---TEKDP---YIKSILPGELAKFEKLLATRGNGRNLILGDKISYADYALFEELDVHQIL-D----PHCLDKFPLLKVFHQRMKDRPKLKEYCEKRDAAKV--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1TU7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127245 for 1463 contacts (-87.0/contact) +
2D Compatibility (PS) -21925 + (NN) -15668 + (LL) 2756
1D Compatibility (HY) -10800 + (ID) 2100
Total energy: -174982.0 ( -119.60 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1TU7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TU7-query.scw
PDB file :
Tito_Scwrl_1TU7.pdb
: