Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSSNGGAIKAVIYDCDGVMFDSFEANLAFYQRIMEMMGRPRLSRDNEEQMRILH-TYANREVLAHFFPSPGDWEEAVRCAGAIDYRELVPLMIMEEGFREALDTLKG-RVGLGVCTNRSTSMDMVLRLFSLDSYFSIVMTASRVTNPKPHPEPLLKVLEHFGIGPREALFVGDSEVDRLSAEAAGVPFVAYKAP-LPAAYRMEHHREIIDLLG
2GO7 Chain:A ((5-204))
----------TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPY-DK---EKVREFIFKYSVQDLLVRVAEDRNLDVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTYEGNHRIQALADISRIF-
General information:
TITO was launched using:
RESULT:
Template:
2GO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141659 for 1594 contacts (-88.9/contact) +
2D Compatibility (PS) -22058 + (NN) -18554 + (LL) 364
1D Compatibility (HY) -9600 + (ID) 2000
Total energy: -193507.0 ( -121.40 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_2GO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GO7-query.scw
PDB file :
Tito_Scwrl_2GO7.pdb
: