Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPVFILGIILLLVGCKQRDERVLMVDEQGSFAVGGTVLVDSLGHTFHGDHAYVFYQKPVGARKYPLVFAHGVGQFSKTWETTPDGREGFQNIFLRRRFCVYLVDQPRRGNAGRGTESVTISPAFDEEVWFNRFRVGIWPDYFEGVQFKRDKETLDQYFRQMTPTIGTTDFEVYSDAYA-----ALFDKIG--PGVFITHSQGGPVGWNTLLKTRNIKAIASYEPGGAVPFPEGQLPEEAKFITLSKKMEGIEVPMSVFMEYTKVPIVIYYGDNLPETDERPELYEWTRRLRLMKIWAKMLNDQGGDVTVIHLPEVGLHGNTHFPMSDLNNIEVADLLSEWLHTKALD |
| 4EB0 Chain:A ((37-227)) | -------------------------------------------------GGGVIYYPTGTSLTFGGIAMSPGYTADASSLA-------WLGRRLASHGFVVLVINTNSRFDYPD------------S--------------------------RA-------------SQLSAALNYLRTSSPSAVRARLDANRLAVAGHSMGGGGTLRIAEQNPSLKAAVPLTPWHTD---------------------------KTF--NTSVPVLIVGAEADTVAPVS---Q-------HAIPFYQNLPST-TPKVYVELDNA-----SHFAPNS-NNAAISVYTISWMKL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136759 for 1685 contacts (-81.2/contact) +
2D Compatibility (PS) -20030 + (NN) -9447 + (LL) 9608
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -161478.0 ( -95.83 by residue)
QMean score : 0.270
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