Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRVIFLLTGLFIWTSVLLAQNVPEGVIGAFKEGNSQELNKYLGDKVDLIIQNKS-THADKRTAEGTMAAFFSNHK-VGSFNVNHQG--KRDESGFVIGILM--TA-----NGNFRVNCFFRKVQNKYVIHQIRIDKTDE
3F7S Chain:A ((12-126))
----------------------QLIERWMQAVRDRDIPGIIAPYADDIVAFDAIQALQFKGKSAYTAHWEMCMGMCTGPMVFELAQLTVHAAGDLALAHWLNRCGPGDDESQCGFMRATVGYRRQGGQWQVIHEHWS----
General information:
TITO was launched using:
RESULT:
Template:
3F7S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48869 for 654 contacts (-74.7/contact) +
2D Compatibility (PS) -10983 + (NN) 753 + (LL) 2840
1D Compatibility (HY) -3200 + (ID) 400
Total energy: -59859.0 ( -91.53 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_3F7S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F7S-query.scw
PDB file :
Tito_Scwrl_3F7S.pdb
: