Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYLTIVIALVTLQSAFSQVISETFSSGRLNRKQKIGIYKPEKYTDRQAYPLIVVLNAET----LMEPVVSMVRYYEQFGEMPKCIVVGVYE-PKQEDVTV-------------VEEVGRPINESARFFEFVSAELVPYIQGKYPIADLKGVIASEEAGFLANYYMLAEKKPTFNMIVSLNPVALPRMG----EEFSHAL----------------AAG-VPNRLFYYMATADVENKVVYDK-AIQFERAMRSAPVHESVEYHFVDFKGSSVNAAKLQGIAQALDMCFDIYKPIGGKEFKTQMETLETGIYEYLENKYNTIYKQLGVKKVPILNDVMATYTAINSSQDWESLKKLAKYVESNGYLKTAMPNFFLAEYYEKIGDDKKALKTYQKAYTEPNIDFITGDLINERITHLQATKRKSKHTKVIEPIEPTEEVAPAQEEQNPTDESNQN |
| 3I6Y Chain:A ((16-259)) | -------------------WHKQYSHVSNTLNCAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAEL----GIAIVAPDTSPRGEGVADDEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPVSDKRAIAGHSMGGHGA-LTIALRNPERYQSVSAFSPINNPVNCPWGQKAFTAYLGKDTDTWREYDASLLMRAAKQYVP--ALVDQGEADNFLAEQLKPEVLEAAASSNN----YPLELRSHEGYDHS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100476 for 1615 contacts (-62.2/contact) +
2D Compatibility (PS) -22250 + (NN) -9538 + (LL) 15252
1D Compatibility (HY) -3200 + (ID) 1750
Total energy: -121962.0 ( -75.52 by residue)
QMean score : 0.216
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