Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDYDEVTAFLGEWGPFQRLIFFLLSASIIPNGFTGLSSVFLIATPEHRCRVPDAANLSSAWRNHTVPLRLRDGREVPHSCRRYRLATIANFSALGLEPGRDVDLGQLEQESCLDGWEFSQDVYLSTIVTEWNLVCEDDWKAPLTISLFFVGVLLGSFISGQLSDRFGRKN------VLFVTMGMQTGFSFLQIFSKNFEM------------FVVLFVLVGMG-----QISNYVAAFVLGTEILGKSVRIIFSTLGVCIFYAFGYMVLPLFAYFIR-----------DWRMLLVALTMPGVLCVALWWFIPESPRWLISQGRFEEAEVIIRKAAKANGIVVPSTIFDPSELQDLSSKKQQSHNILDLLRTWNIR------MVTIMSIMLWMTISVGYFGLSLDTPNLHGDIFVNCFLSAMVEVPAYVLAWLLLQYLPRR-------YSMATALFLGGSVLLFMQLVPPDLYYLATVLVMVGKFGVTAAFSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFV------------YLGAYDRFLPYILMGSLTILTAILTL-FLPESFGTPLPDTIDQMLRVKGMKHRKTPSHTRMLKDGQERPTILKSTAF |
| 4JA4 Chain:A ((66-473)) | ------------------------------------------------------------------------------------------------------------------------------------------------------IGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVS--FNQFAII----FGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLM----QEQAEGILRK--------IMGNTLATQAVQEIKHSLDHG--------MFGVGVIVIGVMLSIFQQFVGINVVLYYAPEV----------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTA-FYTQ--APGIVALLSMLFYVAAFAMSWG-PVCWVLLSEIFPNAIRGKALAIAVAAQWLAN----YFVSWTFPMMDKNSW------NGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -239998 for 2227 contacts (-107.8/contact) +
2D Compatibility (PS) -31966 + (NN) -8110 + (LL) 15596
1D Compatibility (HY) -39200 + (ID) 4250
Total energy: -307928.0 ( -138.27 by residue)
QMean score : 0.192
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