Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQRDTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYIS-EVQLNTMAGASVNRVVSPGPLHCLKVILEKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSNCKEKLNDVF--DPDSTQV-------HMISAAMAGFTAITATNPIWLIKTRLQLDARNRGERR--MGAFECVRKVYQTDGLKGFYRGMSASYAGISETVIHFVIYESIKQKLLEYKTASTMENDEESVKEASDFVGMMLAAATSKTCATTIAYPHEVVRTR-LREEGTK-----YRSFFQTLSLLVQEEGYGSLYRGLTTHLVRQIPNTAIMMATYELVVYLLNG |
| 1OKC Chain:A ((8-293)) | ------LKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYK-------------GIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFA----FKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGI---IIYRAAYFGV------YDTAKGMLPDPKNVH----IIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OKC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86599 for 1963 contacts (-44.1/contact) +
2D Compatibility (PS) -27495 + (NN) -2562 + (LL) 2832
1D Compatibility (HY) -14400 + (ID) 3800
Total energy: -132024.0 ( -67.26 by residue)
QMean score : 0.200
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