Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGHHHHHHSHMVVIHPDPGRELSPEEAHRAGLIDWNMFVKLRSQECDWEEISVKGPNGESSVIHDRKSGKKFSIEEALQSGRLTPAHYDRYVNKDMSIQELAVLVSGQK--------------------------------------------------------------------------------------------------------- |
| 1LM5 Chain:A ((2616-2811)) | ------SSPIAAIFDTENLEKISITEGIERGIVDSITGQRLLEAQA------------CTGGIIHPTTGQKLSLQDAVSQGVIDQDMATRLKPAQKAFIGF-------KMSAAEAVKEKWLPYEAGQRFLEFQYLTGGLVDPEVHGRISTEEAIRKGFIDGRAAQRLQDTSSYAKILTCPKTKLKISYKDAINRSMVEDITGLRLLEAASVSSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2555 for 629 contacts (-4.1/contact) +
2D Compatibility (PS) -8879 + (NN) -1620 + (LL) 992
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -13912.0 ( -22.12 by residue)
QMean score : 0.218
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