Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKMEKKWPFVFNGIVIFCLILLILGMRWQAKKEESEVLNVTESLQKESEITSFSEEEEAVLYMLSALKKNDLDMALRGCAIDETALQINFVKTAEELPGMQLIDLPAPTSDYSYYFPLTSAEMTKAYIEQFEELSTEIPEIETLEVLEIAEKKEKEREEQLAECLAAQEVSELEIYVKCGEQSYRLGFTAVQYEKNWKIHSLKEGLLYETDIPACVQMEEMREAKKTYVLPNQLTGANYFQAMPISEKTPQRAVEQFIYAIEKGDLTRALAFATTESSQDTSPELLKKQGEYAKELKTMLYGFLGTEDARLYGKSEEQLNKLRGKLNPEYMVYLDLIKVIPIETEENTETVKQYAGLYSYNGKNYLTGYTLCRQEDGWQIQSLSAPALSLESGEVMRLSKEESRKTSEQSVLKAEKNER |
4J3N Chain:A ((611-675)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLIQML------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J3N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6542 for 269 contacts (24.3/contact) +
2D Compatibility (PS) -6849 + (NN) -2327 + (LL) 29944
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: 22710.0 ( 84.42 by residue)
QMean score : 0.037
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