Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MDTQQLY--FLNDIGKQKPESIRNRSAACPFCDRENLTDILATEGSIIWLKNKFPTLKDTFQTVLIETDNCEDHIATYTEEHMRSLIRFSIKHWLNLQKNEEFTSVILYKNH---GPFSGGSLHHAHMQIIGMKYVNYL-DNVEQDNFQGVIVQKNEHIELNISDRPIIGFTEFNIIIEDIGCIDELANYIQQTVRYILT-DFHKGCSSYNLFFYYLNEKIICKVVPRFV--VSPLYVGYKIPQVSTKIEDVKIQLAAYFTKQNDAIIHKKIE-------------------------------------- |
| 1DC1 Chain:A ((5-323)) | KPFENHLKSVDDLKTTYEEYRAGFIAFALEKNKRSTPYIERARALKVAA---SVAKTPKDLLYLEDIQDALLYASGISDKAKKFLTEDDKKESINNLIENFLE-PAGEEFIDELIFRYLLFQGDSLGGTMRNIAGALAQQKLTRAIISALDIANIPYKWLDSRDKKYTNWMDKP----EDDYELETFAKGISWTINGKHRTLMYNITVSLVKKNVDICLFNCEPQQPEKYLLLGELKGGIDPAGADEHWKTANTALTRIRNKFSEKGLSPKTIFIGAAIEHSMAEEIWDQLQSGSLTNSANLTKTEQVGSLCRWIINI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65841 for 1684 contacts (-39.1/contact) +
2D Compatibility (PS) -26105 + (NN) 5506 + (LL) 528
1D Compatibility (HY) -800 + (ID) 1850
Total energy: -88562.0 ( -52.59 by residue)
QMean score : 0.110
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