Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MD-ATPN-AVELTVDNAWFIAETIGAG-TFPWVLAITMPYSDA----AQRGAFVDRQRDELTRMGLLSPQ-GVINPA-VADWIKVVCFPDRWLDLRYVGPASADGAC---------ELLRGI------VALRTGTGKTSNKTGNGVVA-LRNAQLVTF-TA-------------MDIDDPRALVPILGVGLAHRPPARFD-EFS-LPTRVGARADERLRSGVPLGEVVDYLGI-PASARPVVESVFSGPR-SYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRVLVSPSRAFDGEWVSTFSPGTPFAIAVA-IQTLTACLPDGQWFPGQRV-SRDFSTQSS |
| 3G8R Chain:A ((5-341)) | KPLFIFEMANNHMGNVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTA-GARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHE-DPDLMEPIMLAVAQGATVFEKHVGLPTDQYGINNYSANPEQVRRWLAAAARALAMLGDGEDDAVSETEQASLRSLRRGVFATRP----VAAGEALTADNVSFAFPPVEGQLTANEWSKYVRYTAKTPIAADAPVMAADLEPV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77091 for 1897 contacts (-40.6/contact) +
2D Compatibility (PS) -29568 + (NN) -15 + (LL) 152
1D Compatibility (HY) 0 + (ID) 1900
Total energy: -108422.0 ( -57.15 by residue)
QMean score : 0.113
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