Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFLAILDLKSLVLNAINYWGPKNNNGIQGGDFGYPISEKQIDTSIITSTHPRLIPHDLTIPQNLETIFTTTQVLTNNTDLQQSQTVSFAKKTTTTTSTSTTNGWTEGGKISDTLEEKVSVSIPFIGEGGGK----NSTTIEANFAHNSSTTTFQQASTDIEWNISQPVLVPPRKQVVATLVIMGGNFTIPMDLMTTIDSTEHYSGYPILTWISSPDNSYNGPFMSWYFANWPNLPSGFGPLNSDNTVTYTGSVVSQVSAGVYATVRFDQYDIHNLRTIEKTWYARHATLHNGKKISINNVTEMAPTSPIKTN |
| 3SGH Chain:A ((296-377)) | ------------------------------------------------------------------TVYANYSKLFIATDKTLPQPVMYAAEAAFLRAEGALKGWNMGGDAKTFYEKGVRLSFEEFGVSGADDYLADATSIPGNYVDN--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14973 for 369 contacts (40.6/contact) +
2D Compatibility (PS) -7820 + (NN) 2858 + (LL) 11896
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: 17307.0 ( 46.90 by residue)
QMean score : 0.014
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