Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQQFQTIALIGIGLIGSSIARDIREKQLAGTIVVTTRSEATLKRAGELGLGDRYTLSAAEAVEGADLVVVSVPVGASGAVAAEIA-AHLKPGAIVTDVGSTKGSVIAQMAPHLP-KDVHFVPGHPIAGTEHSGPDAGFAGLFRGRWCILTPPAGTDEEAVARLRLFWETLGSMVDEMDPKHHDKVLAIVSHLPHIIAYNIVGTADDLETVTESEVIKYSASGFRDFTRLAASDPTMWRDVCLHNKDAILEMLARFSEDLASLQRAIRWGDGDKLFDLFTRTRAIRRSIVQAGQDTAMPDFGRHAMDQK |
| 3DZB Chain:A ((4-284)) | -----KTIYIAGLGLIGGSLALGIKRDHPDYEILGYNRSDYSRNIALERGIVDRATGDFKEFAPLADVIILAVPIKQTMAYLKELADLDLKDNVIITDAGSTKREIVEAAERYLTGKNVQFVGSHPMAGS------AADVTLFENAYYIFTPTSLTKETTIPELKDILSGLKSRYVEIDAAEHDRVTSQISHFPHLLASGLMEQAADYAQAHEM-TNHFAAGGFRDMTRIAESEPGMWASILMTNGPAVLDRIEDFKKRLDHVADLIKAEDESAIWEFFDNGRKKRK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66550 for 2015 contacts (-33.0/contact) +
2D Compatibility (PS) -28606 + (NN) -5778 + (LL) 2012
1D Compatibility (HY) 10400 + (ID) 1650
Total energy: -90172.0 ( -44.75 by residue)
QMean score : 0.213
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