Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMRVYSLLFMMLFALSIGANAQVKFFTDVNSKQIKTLQVKVAGELISEPYIALGGEE-QIEINFDGLGSGYTRYAYNVVHCNADWTQSQLSPIEYMNGFQGTTIDDFANSIGTTT-QYSNYRLL-LPNDDVQFKVSGNYAIQVYNEDTPDQIIFTACFSVVEPVVNISASVSGNTDIDTNQSHQQVSFNINNKNFPITYPQT-DLKIFVYQDNRRDNAVTDLQPMSILENQISYTYNRNLIFPAGNEYRRMEFL-SNKYNGMHVENISFHNPYYNVELMTDYRRDKGTYQYDQDQDGRFFIRCSDCNDPDTEADYYIVHFTLACDP-LPDGSVYLNGELFNNVLDEKSKMGYNFE------TKQYEKAVLLKQGSYN--YQYLFVPTGSSVGQTGPIEGNYYQTQNEYSIYVYYR-PMGARYDRLIGVTTVRNEMQVF |
| 1L0Q Chain:A ((1-391)) | ----------STFAYIANSESDNISVIDVTSNKVTATIPV--------------GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN----SVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVT---------------PDGKKVYVALS----FNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHT--YSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L0Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 27146 for 3105 contacts (8.7/contact) +
2D Compatibility (PS) -37543 + (NN) 5775 + (LL) 2808
1D Compatibility (HY) 21200 + (ID) 950
Total energy: 18436.0 ( 5.94 by residue)
QMean score : 0.057
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