Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAFSRFTPLIQSLPASVPFVGPEALERQHGRKIAARIGANESGFGPAPSVLL----AIRQAAGDTWKYADPENHDLKQALARHL------GTSPANIAIGEGIDGLLGQIVRLVVEAGAPVVTSLGGYPTFNYH---VAGHGGRLVTVPY-ADDREDLEGLLAAVGRENAPLVYLANPDNPMG---SWWPAERVVAFAQALPETTLLVLDEAYCETAPRDALPPIESLIDK--PNVIRARTFSKAYGLAGARIGYTLSTPGTAQAFDKIRNHFGMSRIGVAAAIAALADQ-DYLKEVTLKIANSRQRIGRIAADSGLAPLPSATNFVAVDCGKDASYA-RAIVDRLMSDHGIFIRMPGVA-PLNRCIRISTAPDAEMDLLAAALPEVIRSLAAT |
| 3CQ5 Chain:A ((34-359)) | ------------------------------------RLNTNENPYPPSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAF---GGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGI-----VIVDEAYAEFSPS---PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLPYHLSALSQAAAIVALRHSADTLGTVE-KLSVERVRVAARLEELGYAVVPSESNFVFFGDFSDQHAAWQAFLDR-----GVLIRDVGIAGHLRTTIGVPEENDAFLD---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133976 for 2512 contacts (-53.3/contact) +
2D Compatibility (PS) -33350 + (NN) -23611 + (LL) 5872
1D Compatibility (HY) -20400 + (ID) 4650
Total energy: -210115.0 ( -83.64 by residue)
QMean score : 0.399
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