Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------AARYDDVLYFPASRYPETGAHISD-----AIKAGHADVCTIERSGADKRRQESLKGIPTKPGFDRDEWPMAMCEEGGKGASVRYVSSSDNRGAGSWVGNRLNGYADGTRILFIVQ-- |
| 1IKO Chain:P ((1-141)) | SIVLEPIYWNSSNSKFLPGQGLVLYPQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNKDYYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8247 for 686 contacts (12.0/contact) +
2D Compatibility (PS) -11425 + (NN) -2956 + (LL) 0
1D Compatibility (HY) 0 + (ID) 800
Total energy: -6934.0 ( -10.11 by residue)
QMean score : 0.058
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