Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEAALTPAFEEPEAPRASPRSRSTLLKRLADVVCLPSSRINAFERSM-----TADLLVEMLRDANVGEREKVARRLAMLNEMPGVLVRLLLRDELPVARAL-LVDSEKLSDADLISCLYQATTEHRRLIAQRRGVSEVVADALIEVGEPAVIETLL---RNELVKLSHQGVENIVAA---------TRDAQHLIPLLLRRAELRPSHAYVMFWWADSEARRVILQRFAV---SREILQDAVGDVFALASAEGWQDPLSRKALQFIERRQRNRAAIAKSPFNSLDEAVAAGEGGFNREIAEEISYLSGLKPMTGAKIFT---DPGGEP--LAILCKATGLPRGCVRQLWRGLRRQEVDRTGATDPNLERVLTVYDAIAVDRAQTVLRYWNWSLTSALTPALLKAIRDGDEAAVDEYSAPQRAAMLALSRDFGR |
| 2WZP Chain:R ((1-375)) | MLEANVYDNFNPNYYNISDFSMPNG--KKEKRGLPIPKARCQVINYELWETGYLYTSSATLTVSVEVGD-----------------IVQILFPEVVPIEEALGKKKKLNLDMVYLVTDVDESNKATLKNYFWAMIESLDVPNAITKTTNFAIIDYLIDPNKNNLMSYGYFFNSSIFAGKATINRKAETSSAHDVAKRIFSKVQFQP-TTTIQHAPSETDPRNLLFINFASRNWNRKRITTRVDIKQSVTMDT--ETIVERSAYNFAVVFVKNKAT---DDYTDPPKMYIAKNNGDVIDYSTYHGDGTDLPDVRTAKTLFYDRDDHGNPPELSTIKVEISPSTIVTRLIFN--------------QNELLPLYVNDLVDIWYEGKLYSGYIADRVKTEFNDRLIFVESGDKPNVI------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57774 for 2621 contacts (-22.0/contact) +
2D Compatibility (PS) -35361 + (NN) 3474 + (LL) 4424
1D Compatibility (HY) -9200 + (ID) 2850
Total energy: -97287.0 ( -37.12 by residue)
QMean score : 0.069
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