Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | TMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLIARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHELQRKIHSNSPWWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLLTTQMEELNKCQKLVREAVKNLEGPPSRNVIESATVCHLRPARLPLNCCVFCKADELFTEYESKLFSNTVKGQTAIFEEMIEDEEGLVDDRAPTTTRGLWAISETERSMKAILSFAKSHRFDVEFVDEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVR--DPREPKPNPPVLHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEK |
3E0S Chain:A ((9-317)) | ---------------------------LQLDAHASIHENVRRLLQFTTSIMEANEEGIRKDIDSEFLHDFRVAIRRSRSILRLLNGVFDPEKTAWMLAGLRELGKRTNDLRDSDVYLLR---------REEYTSLLPPSLRPALDPFFSDLE-ADKRLHHRQFCRYLTG--------------------------------REYSGFMTSLKEFIAEGELPD---------------------------------PETAPLAAEPTGDVAAKTIRKALKKVLVHGRS-----------DAELHELRIDCKKLRYLLEFFASLFP--------PKATAQVLRQMKTLQDNLGTFVDLTVQMEFLQSRLETISEAAAIGGLLTTLYRKREKVREHFHEIFSGFDSNETGELFDELLTGL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15290 for 2172 contacts (-7.0/contact) +
2D Compatibility (PS) -32979 + (NN) -21338 + (LL) 10828
1D Compatibility (HY) -2000 + (ID) 1450
Total energy: -62229.0 ( -28.65 by residue)
QMean score : 0.293
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