Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | DSLPERIDLFVSLFDYNSATTSYDIRSIQTDFPTRLLTPDSMLPQTSEYPLKDIQLLYKLAQSCTGKLPLSPLITEPLVFTRSLCKGSSLSPRWFARSGLIHPGGGTYAFRYAEKYPAQFANLLPYMHIQERPNAAEGTLLYHLQNMGEDAINALVSGASMFGSGSDLWLRKGDIYYLFNEETWLTNANKAGLSYSLLSADNTCFIQRGNICWDVEDHS |
3GGW Chain:A ((2-79)) | ------------------------------------------------------------------------IVMTQAAFSNPVTLGTSASISCRSSKSLLHSDGITYLYWYLQK-PGQSPHL----------------LIYHLSNLASGVPDRFSSS----GSGTDFTLR------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GGW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26905 for 439 contacts (-61.3/contact) +
2D Compatibility (PS) -7876 + (NN) 990 + (LL) 8080
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -31011.0 ( -70.64 by residue)
QMean score : -0.024
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