Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHHHHHHFISPQKIVPLSYNEFIRKVVSDHSIQEQEKEIRRLSQIVFGNQNQLANQLSQIHEN---PSFTKIISNTLTNSPESFAKLAGSKTFGIKNSKRKQAEKNISKLVEAIHKYADAVENSMGNIIKNHNAEQKRLAQSVELPSD
3LS0 Chain:A ((32-146))
------------------TYS------------PEKIAQLQVYVNPIAVARDGMEKRLQGLIADQNWVDTQTYIHGPLGQLRRDMLGLASS----LLPKDQDKAKTLAKEVFGHLERLDAAAKDRNGSQAKIQYQEALADFDSFLNLLP
General information:
TITO was launched using:
RESULT:
Template:
3LS0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5465 for 799 contacts (-6.8/contact) +
2D Compatibility (PS) -12384 + (NN) -5223 + (LL) 2580
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -24392.0 ( -30.53 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_3LS0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LS0-query.scw
PDB file :
Tito_Scwrl_3LS0.pdb
: