Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ATMAFHPMLCRLELSVSAAPPASPIDATLLRSLITSVLNSSWVDLGGNTANEKVLCAIGLIEAFCRERVIPPTSNSFNTSVTYHIM--VEDLDPDDLGNIQLINKPLLSLEGD---LKVLGSYQLTFQTIPGHSEPRSMTDNGIYHSDSPFFQIALGHALLGTGKIYDHITRALRVAPITIAPEKRKEPLSSYMV |
| 3S4D Chain:A ((364-456)) | --------------------------------------------MGFRDSNQDLLGFVHLIPERARERIIDIASTQFADGSAYHQYQPLTKRGNNDIGS-GFNDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGS--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7355 for 585 contacts (12.6/contact) +
2D Compatibility (PS) -8941 + (NN) 152 + (LL) 7216
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: 182.0 ( 0.31 by residue)
QMean score : -0.038
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