Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDTGLRKRREDEKSIQSQEPKTTSLQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLG-ALCFAELGTMITKSGGEYPYLMEAYGPIPAY---LFSWASLIVIKPTSFAIICLSFSEYVCAPFYVGCKPPQIV-VKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKLV-IVAIIIISGLVLLAQGNTKNFDNSFEGAQLSVGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTACYILMNVSYFTVMTATELLQSQAVAVTFGDRVLYPASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSYISVRRLTPAPAIIFYGIIATIYIIPGDINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVPVVIPVLMTLISVFLVLAPIISKPTWEYLYCVLFILSGLLFYFLFVHYKFGWAQKISKPITMHLQMLMEVVPPEEDPE |
| 3LRC Chain:A ((8-337)) | ---------------------------HKVGLIPVTLMVSGNIMGSGVFLLP----ANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACW-IGNIAMVVIGVGYLSY----FFPILKDPLVLTITCVVVLWIFVL--LNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLG---TFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPN---------------T----AGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVN-KAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNP------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250367 for 2645 contacts (-94.7/contact) +
2D Compatibility (PS) -30427 + (NN) -1049 + (LL) 6148
1D Compatibility (HY) -28000 + (ID) 3800
Total energy: -307495.0 ( -116.26 by residue)
QMean score : 0.173
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