Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDHSHHMGMSYMDSNSTMQPSHHHPTTSASHSHGGGDSSMMMMPMTFYFGFKNVELLFSGLVINTAGEMAGAFVAVFLLAMFYEGLKIARESLLRKSQVSIRYNSMPVPGPNGTILMETHKTVGQQMLSFPHLLQTVLHIIQVVISYFLMLIFMTYNGYLCIAVAAGAGTGYFLFSWKKAVVVDITEHCH |
| 2LS4 Chain:A ((1-23)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------YNGYLCIAVAAGAGTGYFLFSWKK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2226 for 88 contacts (-25.3/contact) +
2D Compatibility (PS) -2513 + (NN) -289 + (LL) 12336
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: 1758.0 ( 19.98 by residue)
QMean score : -0.214
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