Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAEARVSRWYFGGLASCGAACC-----THPLDLLKVHLQTQQEVKLR------MTGMALRVVRTDGILALYSGLSASLCRQMTYSLTRFAIYETVRDRVAKGSQGPLPFHEKVLLGSVSGLAGGFVGTPADLVNVRMQNDVKLPQGQRRNYAHALDGLYRVAREEGLRRLFSGATMASSRGALVTVGQLSCYDQAKQLVLSTGYLSDNIFTHFVASFIAGGCATFLCQPLDVLKTRLMNSKGEYQGVFHCAVETAKLGPLAFYKGLVPAGIRLIPHTVLTFVFLEQLRKNFGIKVPS |
| 4C9H Chain:A ((120-313)) | ---EEGYAKWFAGNLASGGAAGALSLLFVYSLDYARTRLAADS-----ARQFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSLK-------------LASFLLGWVVTTGASTCSYPLDTVRRRMM----MTSGQAVKYDGAFDCLRKIVAAEGVGSLFKGCGANILRG-VAGAGVISMYDQLQMILFGKKFK-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50025 for 1057 contacts (-47.3/contact) +
2D Compatibility (PS) -16802 + (NN) -646 + (LL) 7872
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -72401.0 ( -68.50 by residue)
QMean score : 0.192
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